day <- rep(1:3,each=6) run <- rep(1:6,each=3) glucose <- c(42.5,43.3,42.9,42.2,41.4,41.8, 48.0,44.6,43.7,42.0,42.8,42.8, 41.7,43.4,42.5,40.6,41.8,41.8) clin <- data.frame(day,run,glucose) attach(clin) day <- factor(day) run <- factor(run) glucose.mod1 <- aov(glucose ~ day + day/run) summary(glucose.mod1) glucose.mod2 <- aov(glucose ~ day + Error(run)) summary(glucose.mod2) library(nlme) glucose.mod3 <- lme(fixed=glucose~1,random=~1|day/run) summary(glucose.mod3) intervals(glucose.mod3) library(lme4) glucose.mod4 <- lmer(glucose~1+(1|day/run)) summary(glucose.mod4)